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Uk biobank cardiac is a toolbox  is a neural network method which segments a cardiac MR image sequence across all the time frames of a cardiac cycle. The network was trained on the UK Biobank cardiac image set and it achieves a segmentation performance comparable to human experts.

It consists of several parts:

  • pre-processing the original DICOM images, converting them into NIfTI format, which is more convenient for image analysis;
  • training fully convolutional networks for short-axis and long-axis CMR image segmentation;
  • deploying the networks to new images.

You can download uk_biobank_cardiac in the link below:

https://github.com/baiwenjia/ukbb_cardiac 

UK Biobank Cardiac

Toolbox used for processing and analysing cardiovascular magnetic resonance (CMR) images from the UK Biobank Imaging Study

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